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- S. Naidu, J. L. Margot, M. W. Busch, P. A. Taylor, M. C. Nolan, M. Brozovic, L. A. M. Benner, J. D. Giorgini, C. Magri. Radar Imaging and Physical Characterization of Near-Earth Asteroid (162421) 2000 ET70. Icarus 226, 323, 2013.
- J. Fang and J. L. Margot Are Planetary Systems Filled to Capacity? A Study Based on Kepler Results. Astrophysical Journal 767, 115, 2013.
- J. Fang and J. L. Margot Architecture of Planetary Systems Based on Kepler Data: Number of Planets and Coplanarity. Astrophysical Journal 761, 92, 2012.
- J. L. Margot, S. J. Peale, S. C. Solomon, S. A. Hauck II, F. D. Ghigo, R. F. Jurgens, M. Yseboodt, J. D. Giorgini, S. Padovan, D. B. Campbell. Mercury's moment of inertia from spin and gravity data. Journal of Geophysical Research 117, E00L09, 2012.
- J. Fang, J. L. Margot, P. Rojo. Orbits, Masses, and Evolution of Main Belt Triple (87) Sylvia. Astronomical Journal 144, 70, 2012.
- C. R. Nugent, J. L. Margot, S. R. Chesley, and D. Vokrouhlicky. Detection of Semi-Major Axis Drifts in 54 Near-Earth Asteroids: New Measurements of the Yarkovsky Effect. Astronomical Journal 144, 60, 2012.
- J. Fang and J. L. Margot. Predicting Planets in Kepler Multi-Planet Systems. Astrophysical Journal 751, 23, 2012.
- J. Fang and J. L. Margot. The Role of Kozai Cycles in Near-Earth Binary Asteroids. Astronomical Journal 143, 59, 2012.
- J. Fang and J. L. Margot. Binary Asteroid Encounters with Terrestrial Planets: Timescales and Effects. Astronomical Journal 143, 25, 2012.
- J. Fang and J. L. Margot. Near-Earth Binaries and Triples: Origin and Evolution of Spin-Orbital Properties. Astronomical Journal 143, 24, 2012.
- J. Fang, J. L. Margot, M. Brozovic, M. C. Nolan, L. A. M. Benner, P. A. Taylor. Orbits of near-Earth asteroid triples 2001 SN263 and 1994 CC: properties, origin, and evolution. Astronomical Journal 141, 154-, 2011.
- P. A. Taylor and J. L. Margot. Binary Asteroid Systems: Tidal End States and Estimates of Material Properties Icarus 212, 661-, 2011.
- P. A. Taylor and J. L. Margot. Tidal Evolution of Close Binary Asteroid Systems. Celestial Mechanics and Dynamical Astronomy 108, 315-338, 2010.
- J. L. Margot and J. D. Giorgini. Probing general relativity with radar astrometry in the inner solar system. Relativity in Fundamental Astronomy: Dynamics, Reference Frames, and Data Analysis, Proceedings of the International Astronomical Union, IAU Symposium 261, pp. 183-188, 2010.
- J. L. Margot. A Mercury orientation model including non-zero obliquity and librations. Celestial Mechanics and Dynamical Astronomy 105, pp. 329-336, 2009.
- J. L. Margot, S. J. Peale, R. F. Jurgens, M. A. Slade, I. V. Holin. Large longitude libration of Mercury reveals a molten core. Science 316, pp. 710-714, 2007.
- P. A. Taylor, J. L. Margot, D. Vokrouhlicky, D. J. Scheeres, P. Pravec, S. C. Lowry, A. Fitzsimmons, M. C. Nolan, S. J. Ostro, L. A. M. Benner, J. D. Giorgini, C. Magri. Spin Rate of Asteroid (54509) 2000 PH5 Increasing due to the YORP Effect. Science 316, pp. 274-277, 2007.
- M. Yseboodt and J. L. Margot. Evolution of Mercury's Obliquity. Icarus 181, pp. 327-337, 2006.
- J. L. Margot and M. E. Brown. A Low-Density M-type Asteroid in the Main Belt. Science 300, pp. 1939-1942, 2003.
- J. L. Margot, M. C. Nolan, L. A. M. Benner, S. J. Ostro, R. F. Jurgens, J. D. Giorgini, M. A. Slade, and D. B. Campbell. Binary Asteroids in the Near-Earth Object Population. Science 296, pp. 1445-1448, 2002.
- J. L. Margot, D. B. Campbell, R. F. Jurgens, and M. A. Slade. Digital elevation models of the Moon from Earth-based radar interferometry. IEEE Trans. Geoscience and Remote Sensing 38, pp. 1122--1133, 2000.
- J. L. Margot, D. B. Campbell, R. F. Jurgens, and M. A. Slade. Topography of the Lunar Poles from Radar Interferometry: A Survey of Cold Trap Locations. Science 284, pp. 1658-1660, 1999.
- J. L. Margot, D. B. Campbell, R. F. Jurgens, and M. A. Slade. The topography of Tycho Crater. J. Geophys. Res. 104, E5, pp. 11875-11882, 1999.